Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB5BP61020 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB5BP61020 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 AC015818.8-201ENST00000587907 1519 ntBASIC12.37□□□□□ -0.43
RAB5BP61020 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5BP61020 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5BP61020 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RAB5BP61020 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB5BP61020 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RAB5BP61020 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB5BP61020 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
RAB5BP61020 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB5BP61020 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.36□□□□□ -0.43
RAB5BP61020 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.36□□□□□ -0.43
RAB5BP61020 AP000692.2-201ENST00000608391 879 ntBASIC12.36□□□□□ -0.43
RAB5BP61020 MYC-209ENST00000641252 345 ntBASIC12.36□□□□□ -0.43
RAB5BP61020 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RAB5BP61020 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 AC011700.1-201ENST00000610409 2627 ntBASIC12.36□□□□□ -0.43
RAB5BP61020 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5BP61020 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5BP61020 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RAB5BP61020 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 AC114271.1-201ENST00000612689 2813 ntBASIC12.35□□□□□ -0.43
RAB5BP61020 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RAB5BP61020 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RAB5BP61020 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.35□□□□□ -0.43
RAB5BP61020 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms