Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PKNOX1P55347 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.55■□□□□ 0.08
PKNOX1P55347 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.55■□□□□ 0.08
PKNOX1P55347 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 AC004987.2-201ENST00000395959 1148 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 AL355306.1-201ENST00000415580 579 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 AL671277.1-201ENST00000429656 993 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PKNOX1P55347 KRT18P3-201ENST00000451602 1288 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.55■□□□□ 0.08
PKNOX1P55347 AL135744.1-201ENST00000565098 629 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 BX640515.1-201ENST00000617215 977 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 AC139749.1-202ENST00000617529 3139 ntBASIC15.55■□□□□ 0.08
PKNOX1P55347 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PKNOX1P55347 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.55■□□□□ 0.08
PKNOX1P55347 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PKNOX1P55347 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.55■□□□□ 0.08
PKNOX1P55347 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PKNOX1P55347 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PKNOX1P55347 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 BNIP3P1-202ENST00000550043 1585 ntBASIC15.54■□□□□ 0.08
PKNOX1P55347 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PKNOX1P55347 TFAMP1-201ENST00000412727 736 ntBASIC15.54■□□□□ 0.08
PKNOX1P55347 MED15P5-201ENST00000423150 992 ntBASIC15.54■□□□□ 0.08
PKNOX1P55347 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 RN7SL589P-201ENST00000481268 310 ntBASIC15.54■□□□□ 0.08
PKNOX1P55347 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.54■□□□□ 0.08
PKNOX1P55347 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.54■□□□□ 0.08
PKNOX1P55347 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 AC106730.1-201ENST00000566722 1090 ntBASIC15.54■□□□□ 0.08
PKNOX1P55347 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.54■□□□□ 0.08
PKNOX1P55347 AC140113.2-201ENST00000604370 208 ntBASIC15.54■□□□□ 0.08
PKNOX1P55347 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PKNOX1P55347 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PKNOX1P55347 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PKNOX1P55347 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.54■□□□□ 0.08
PKNOX1P55347 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PKNOX1P55347 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PKNOX1P55347 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PKNOX1P55347 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PKNOX1P55347 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PKNOX1P55347 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PKNOX1P55347 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PKNOX1P55347 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.53■□□□□ 0.08
PKNOX1P55347 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms