Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPDP35247 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPDP35247 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPDP35247 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SFTPDP35247 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.33□□□□□ -0.11
SFTPDP35247 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPDP35247 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.33□□□□□ -0.11
SFTPDP35247 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPDP35247 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SFTPDP35247 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.33□□□□□ -0.11
SFTPDP35247 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.33□□□□□ -0.11
SFTPDP35247 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPDP35247 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPDP35247 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPDP35247 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SFTPDP35247 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SFTPDP35247 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SFTPDP35247 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.33□□□□□ -0.12
SFTPDP35247 TSSK5P-201ENST00000423978 907 ntBASIC14.33□□□□□ -0.12
SFTPDP35247 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.33□□□□□ -0.12
SFTPDP35247 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.33□□□□□ -0.12
SFTPDP35247 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.33□□□□□ -0.12
SFTPDP35247 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPDP35247 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPDP35247 AC044860.1-202ENST00000559481 777 ntBASIC14.33□□□□□ -0.12
SFTPDP35247 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.33□□□□□ -0.12
SFTPDP35247 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPDP35247 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SFTPDP35247 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.33□□□□□ -0.12
SFTPDP35247 AL109936.8-201ENST00000641772 604 ntBASIC14.33□□□□□ -0.12
SFTPDP35247 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPDP35247 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.33□□□□□ -0.12
SFTPDP35247 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SFTPDP35247 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
SFTPDP35247 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SFTPDP35247 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPDP35247 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SFTPDP35247 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.32□□□□□ -0.12
SFTPDP35247 AC022144.1-201ENST00000602255 1580 ntBASIC14.32□□□□□ -0.12
SFTPDP35247 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.32□□□□□ -0.12
SFTPDP35247 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.32□□□□□ -0.12
SFTPDP35247 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 AC004890.2-204ENST00000481968 304 ntBASIC14.32□□□□□ -0.12
SFTPDP35247 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.32□□□□□ -0.12
SFTPDP35247 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPDP35247 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.32□□□□□ -0.12
SFTPDP35247 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.32□□□□□ -0.12
SFTPDP35247 AP005117.1-202ENST00000581724 1908 ntBASIC14.32□□□□□ -0.12
SFTPDP35247 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPDP35247 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPDP35247 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms