Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF1P30408 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF1P30408 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TM4SF1P30408 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.27■□□□□ 0.68
TM4SF1P30408 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 FTLP1-201ENST00000449155 526 ntBASIC19.27■□□□□ 0.68
TM4SF1P30408 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.27■□□□□ 0.68
TM4SF1P30408 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.27■□□□□ 0.68
TM4SF1P30408 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.27■□□□□ 0.68
TM4SF1P30408 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.27■□□□□ 0.68
TM4SF1P30408 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TM4SF1P30408 OR10B1P-201ENST00000601666 907 ntBASIC19.27■□□□□ 0.68
TM4SF1P30408 AF254983.2-201ENST00000612331 135 ntBASIC19.27■□□□□ 0.68
TM4SF1P30408 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
TM4SF1P30408 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF1P30408 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
TM4SF1P30408 KRT8P4-201ENST00000509735 1454 ntBASIC19.27■□□□□ 0.67
TM4SF1P30408 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM4SF1P30408 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM4SF1P30408 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TM4SF1P30408 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
TM4SF1P30408 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 AL158070.2-201ENST00000623713 1621 ntBASIC19.26■□□□□ 0.67
TM4SF1P30408 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.26■□□□□ 0.67
TM4SF1P30408 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.26■□□□□ 0.67
TM4SF1P30408 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.26■□□□□ 0.67
TM4SF1P30408 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.26■□□□□ 0.67
TM4SF1P30408 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.26■□□□□ 0.67
TM4SF1P30408 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.26■□□□□ 0.67
TM4SF1P30408 AC024681.1-201ENST00000521917 487 ntBASIC19.26■□□□□ 0.67
TM4SF1P30408 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.26■□□□□ 0.67
TM4SF1P30408 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.26■□□□□ 0.67
TM4SF1P30408 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 AC018635.2-201ENST00000608625 364 ntBASIC19.26■□□□□ 0.67
TM4SF1P30408 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.26■□□□□ 0.67
TM4SF1P30408 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF1P30408 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TM4SF1P30408 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TM4SF1P30408 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF1P30408 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TM4SF1P30408 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF1P30408 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF1P30408 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF1P30408 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF1P30408 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.25■□□□□ 0.67
TM4SF1P30408 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF1P30408 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TM4SF1P30408 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.25■□□□□ 0.67
TM4SF1P30408 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.25■□□□□ 0.67
TM4SF1P30408 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF1P30408 RN7SL11P-201ENST00000471305 293 ntBASIC19.25■□□□□ 0.67
TM4SF1P30408 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF1P30408 PRKXP1-201ENST00000561423 1122 ntBASIC19.25■□□□□ 0.67
TM4SF1P30408 AC106820.3-201ENST00000561653 397 ntBASIC19.25■□□□□ 0.67
TM4SF1P30408 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.25■□□□□ 0.67
TM4SF1P30408 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.25■□□□□ 0.67
TM4SF1P30408 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF1P30408 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.25■□□□□ 0.67
TM4SF1P30408 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF1P30408 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TM4SF1P30408 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TM4SF1P30408 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TM4SF1P30408 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF1P30408 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF1P30408 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms