Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.35□□□□□ -0.27
COL8A2P25067 AC099568.2-201ENST00000609194 695 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
COL8A2P25067 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
COL8A2P25067 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 AC103702.1-201ENST00000548801 2630 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
COL8A2P25067 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.34□□□□□ -0.27
COL8A2P25067 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.34□□□□□ -0.27
COL8A2P25067 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 INE1-201ENST00000456273 945 ntBASIC13.34□□□□□ -0.27
COL8A2P25067 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.34□□□□□ -0.27
COL8A2P25067 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 AC093726.1-201ENST00000608064 963 ntBASIC13.34□□□□□ -0.27
COL8A2P25067 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 CLK3P2-201ENST00000427566 1453 ntBASIC13.34□□□□□ -0.27
COL8A2P25067 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.34□□□□□ -0.27
COL8A2P25067 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
COL8A2P25067 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
COL8A2P25067 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COL8A2P25067 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
COL8A2P25067 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
COL8A2P25067 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
COL8A2P25067 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
COL8A2P25067 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
COL8A2P25067 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 AC023824.1-201ENST00000562945 2975 ntBASIC13.33□□□□□ -0.28
COL8A2P25067 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
COL8A2P25067 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
COL8A2P25067 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 RN7SL399P-201ENST00000471648 279 ntBASIC13.33□□□□□ -0.28
COL8A2P25067 AC104596.2-201ENST00000512793 793 ntBASIC13.33□□□□□ -0.28
COL8A2P25067 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.33□□□□□ -0.28
COL8A2P25067 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 AC132938.2-201ENST00000579188 680 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms