Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 GRK6P1-201ENST00000400595 1711 ntBASIC14.8□□□□□ -0.04
NR4A1P22736 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 AC232323.1-201ENST00000540724 2099 ntBASIC14.8□□□□□ -0.04
NR4A1P22736 REXO1L5P-201ENST00000622260 2098 ntBASIC14.8□□□□□ -0.04
NR4A1P22736 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 PRSS29P-201ENST00000440800 595 ntBASIC14.79□□□□□ -0.04
NR4A1P22736 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 AC108073.2-201ENST00000464002 357 ntBASIC14.79□□□□□ -0.04
NR4A1P22736 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.79□□□□□ -0.04
NR4A1P22736 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 AC027601.4-201ENST00000611259 610 ntBASIC14.79□□□□□ -0.04
NR4A1P22736 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 PCGF3-213ENST00000620529 1899 ntBASIC14.79□□□□□ -0.04
NR4A1P22736 AC004790.2-201ENST00000623588 572 ntBASIC14.79□□□□□ -0.04
NR4A1P22736 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
NR4A1P22736 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR4A1P22736 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NR4A1P22736 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.79□□□□□ -0.04
NR4A1P22736 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 LINC01101-201ENST00000622953 1884 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NR4A1P22736 OR2I1P-209ENST00000641730 5365 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 AC092919.2-201ENST00000623631 1645 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 LINC01230-201ENST00000625222 3017 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 AC041040.2-201ENST00000622926 2899 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.78□□□□□ -0.04
NR4A1P22736 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NR4A1P22736 MRPL20P1-201ENST00000400819 433 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 AL591424.1-201ENST00000442569 1213 ntBASIC14.78□□□□□ -0.04
NR4A1P22736 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.78□□□□□ -0.04
NR4A1P22736 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.78□□□□□ -0.04
NR4A1P22736 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NR4A1P22736 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NR4A1P22736 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.78□□□□□ -0.04
NR4A1P22736 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NR4A1P22736 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.78□□□□□ -0.04
NR4A1P22736 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR4A1P22736 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms