Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.62■□□□□ 0.09
CAPN1P07384 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.62■□□□□ 0.09
CAPN1P07384 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN1P07384 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.62■□□□□ 0.09
CAPN1P07384 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 FOXO1B-201ENST00000504678 1527 ntBASIC15.62■□□□□ 0.09
CAPN1P07384 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CAPN1P07384 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN1P07384 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.61■□□□□ 0.09
CAPN1P07384 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.61■□□□□ 0.09
CAPN1P07384 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.61■□□□□ 0.09
CAPN1P07384 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CAPN1P07384 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.61■□□□□ 0.09
CAPN1P07384 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN1P07384 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.61■□□□□ 0.09
CAPN1P07384 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.61■□□□□ 0.09
CAPN1P07384 RNA5SP421-201ENST00000516864 134 ntBASIC15.61■□□□□ 0.09
CAPN1P07384 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN1P07384 AC105233.2-201ENST00000523697 349 ntBASIC15.61■□□□□ 0.09
CAPN1P07384 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN1P07384 AF228730.5-201ENST00000530288 346 ntBASIC15.61■□□□□ 0.09
CAPN1P07384 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN1P07384 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.61■□□□□ 0.09
CAPN1P07384 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.61■□□□□ 0.09
CAPN1P07384 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.61■□□□□ 0.09
CAPN1P07384 MIR6080-201ENST00000617359 66 ntBASIC15.61■□□□□ 0.09
CAPN1P07384 AJ011932.1-201ENST00000621707 465 ntBASIC15.61■□□□□ 0.09
CAPN1P07384 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN1P07384 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CAPN1P07384 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN1P07384 AC023824.1-201ENST00000562945 2975 ntBASIC15.61■□□□□ 0.09
CAPN1P07384 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.61■□□□□ 0.09
CAPN1P07384 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN1P07384 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN1P07384 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 MIR600HG-201ENST00000449175 5984 ntBASIC15.6■□□□□ 0.09
CAPN1P07384 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 SSR4P1-203ENST00000599569 2260 ntBASIC15.6■□□□□ 0.09
CAPN1P07384 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.6■□□□□ 0.09
CAPN1P07384 AL035633.1-201ENST00000406139 838 ntBASIC15.6■□□□□ 0.09
CAPN1P07384 TREML5P-201ENST00000421694 576 ntBASIC15.6■□□□□ 0.09
CAPN1P07384 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.6■□□□□ 0.09
CAPN1P07384 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CAPN1P07384 MIR4745-201ENST00000577608 62 ntBASIC15.6■□□□□ 0.09
CAPN1P07384 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.6■□□□□ 0.09
CAPN1P07384 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.6■□□□□ 0.09
CAPN1P07384 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.6■□□□□ 0.09
CAPN1P07384 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms