Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 AL691432.1-201ENST00000596308 1422 ntBASIC13.16□□□□□ -0.3
CTSDP07339 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 AC092474.2-201ENST00000424288 719 ntBASIC13.16□□□□□ -0.3
CTSDP07339 FAM8A3P-201ENST00000427218 844 ntBASIC13.16□□□□□ -0.3
CTSDP07339 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 PRSS29P-201ENST00000440800 595 ntBASIC13.16□□□□□ -0.3
CTSDP07339 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.16□□□□□ -0.3
CTSDP07339 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.16□□□□□ -0.3
CTSDP07339 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.16□□□□□ -0.3
CTSDP07339 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CTSDP07339 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTSDP07339 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.16□□□□□ -0.3
CTSDP07339 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTSDP07339 BNIP3P1-202ENST00000550043 1585 ntBASIC13.15□□□□□ -0.3
CTSDP07339 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.15□□□□□ -0.3
CTSDP07339 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.15□□□□□ -0.3
CTSDP07339 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CTSDP07339 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTSDP07339 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.15□□□□□ -0.3
CTSDP07339 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CTSDP07339 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.15□□□□□ -0.3
CTSDP07339 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.15□□□□□ -0.3
CTSDP07339 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CTSDP07339 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CTSDP07339 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CTSDP07339 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 AKR1C7P-201ENST00000305623 895 ntBASIC13.15□□□□□ -0.3
CTSDP07339 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.15□□□□□ -0.3
CTSDP07339 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CTSDP07339 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.15□□□□□ -0.3
CTSDP07339 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.15□□□□□ -0.3
CTSDP07339 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.15□□□□□ -0.3
CTSDP07339 AC073648.2-201ENST00000510116 352 ntBASIC13.15□□□□□ -0.3
CTSDP07339 PRYP6-201ENST00000514804 343 ntBASIC13.15□□□□□ -0.3
CTSDP07339 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CTSDP07339 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms