Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AC008738.7-201ENST00000609744 511 ntBASIC15.99■□□□□ 0.15
HLA-DQB2P05538 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DQB2P05538 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 BASP1P1-201ENST00000430708 665 ntBASIC15.98■□□□□ 0.15
HLA-DQB2P05538 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 SPDYE18-201ENST00000510091 1050 ntBASIC15.98■□□□□ 0.15
HLA-DQB2P05538 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC022144.1-201ENST00000602255 1580 ntBASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC022532.1-201ENST00000624563 1728 ntBASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC004461.2-201ENST00000629517 803 ntBASIC15.98■□□□□ 0.15
HLA-DQB2P05538 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AC004840.1-201ENST00000636359 365 ntBASIC15.98■□□□□ 0.15
HLA-DQB2P05538 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms