Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
MT-ND3P03897 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND3P03897 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND3P03897 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND3P03897 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
MT-ND3P03897 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 AC002056.1-201ENST00000395613 760 ntBASIC16.17■□□□□ 0.18
MT-ND3P03897 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 AL645939.2-201ENST00000427340 991 ntBASIC16.17■□□□□ 0.18
MT-ND3P03897 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 HMGN1P19-201ENST00000436976 333 ntBASIC16.17■□□□□ 0.18
MT-ND3P03897 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 AC092127.1-201ENST00000567093 3455 ntBASIC16.17■□□□□ 0.18
MT-ND3P03897 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND3P03897 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND3P03897 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.17■□□□□ 0.18
MT-ND3P03897 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MT-ND3P03897 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.16■□□□□ 0.18
MT-ND3P03897 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.16■□□□□ 0.18
MT-ND3P03897 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-ND3P03897 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-ND3P03897 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-ND3P03897 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.16■□□□□ 0.18
MT-ND3P03897 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 AC007326.2-201ENST00000624224 7579 ntBASIC16.16■□□□□ 0.18
MT-ND3P03897 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MT-ND3P03897 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.16■□□□□ 0.18
MT-ND3P03897 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.15■□□□□ 0.18
MT-ND3P03897 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 TCAF2P1-201ENST00000291129 2421 ntBASIC16.15■□□□□ 0.18
MT-ND3P03897 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms