Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.79□□□□□ -0.2
UPK1BO75841 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 AC083964.2-201ENST00000623988 2396 ntBASIC13.79□□□□□ -0.2
UPK1BO75841 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
UPK1BO75841 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1BO75841 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
UPK1BO75841 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 HMGA1P5-201ENST00000412453 271 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1BO75841 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1BO75841 AC128676.1-201ENST00000454392 318 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 AC009533.2-201ENST00000543664 586 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 RARRES2P6-201ENST00000567333 442 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.78□□□□□ -0.2
UPK1BO75841 AP001412.1-201ENST00000608405 714 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 MIR5787-201ENST00000611784 55 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 FAM197Y4-202ENST00000622692 608 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 AP001350.2-201ENST00000625104 1094 ntBASIC13.78□□□□□ -0.2
UPK1BO75841 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
UPK1BO75841 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1BO75841 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1BO75841 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
UPK1BO75841 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1BO75841 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.77□□□□□ -0.2
UPK1BO75841 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1BO75841 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
UPK1BO75841 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1BO75841 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1BO75841 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.77□□□□□ -0.2
UPK1BO75841 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1BO75841 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.77□□□□□ -0.2
UPK1BO75841 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1BO75841 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
UPK1BO75841 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK1BO75841 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1BO75841 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
UPK1BO75841 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK1BO75841 NCF1C-201ENST00000438382 1427 ntBASIC13.77□□□□□ -0.21
UPK1BO75841 AL023775.1-201ENST00000454907 1746 ntBASIC13.77□□□□□ -0.21
UPK1BO75841 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK1BO75841 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK1BO75841 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
UPK1BO75841 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms