Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.5■□□□□ 0.07
PEX1O43933 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.5■□□□□ 0.07
PEX1O43933 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.5■□□□□ 0.07
PEX1O43933 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.5■□□□□ 0.07
PEX1O43933 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
PEX1O43933 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PEX1O43933 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PEX1O43933 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PEX1O43933 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 PCGF3-213ENST00000620529 1899 ntBASIC15.5■□□□□ 0.07
PEX1O43933 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PEX1O43933 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 CNN2P11-201ENST00000429351 262 ntBASIC15.49■□□□□ 0.07
PEX1O43933 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 AP002472.1-201ENST00000577490 586 ntBASIC15.49■□□□□ 0.07
PEX1O43933 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 AL645728.2-201ENST00000641974 660 ntBASIC15.49■□□□□ 0.07
PEX1O43933 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.49■□□□□ 0.07
PEX1O43933 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.49■□□□□ 0.07
PEX1O43933 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
PEX1O43933 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.49■□□□□ 0.07
PEX1O43933 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PEX1O43933 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PEX1O43933 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PEX1O43933 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PEX1O43933 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PEX1O43933 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PEX1O43933 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.48■□□□□ 0.07
PEX1O43933 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PEX1O43933 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PEX1O43933 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.48■□□□□ 0.07
PEX1O43933 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.48■□□□□ 0.07
PEX1O43933 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PEX1O43933 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms