Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.7■□□□□ 0.26
DCXO43602 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
DCXO43602 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.7■□□□□ 0.26
DCXO43602 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.7■□□□□ 0.26
DCXO43602 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.7■□□□□ 0.26
DCXO43602 AC253536.4-201ENST00000440539 267 ntBASIC16.7■□□□□ 0.26
DCXO43602 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.7■□□□□ 0.26
DCXO43602 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.7■□□□□ 0.26
DCXO43602 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
DCXO43602 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.7■□□□□ 0.26
DCXO43602 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.7■□□□□ 0.26
DCXO43602 AC024267.1-201ENST00000582320 895 ntBASIC16.7■□□□□ 0.26
DCXO43602 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.7■□□□□ 0.26
DCXO43602 AC020765.3-201ENST00000613051 740 ntBASIC16.7■□□□□ 0.26
DCXO43602 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.7■□□□□ 0.26
DCXO43602 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
DCXO43602 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.7■□□□□ 0.26
DCXO43602 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.7■□□□□ 0.26
DCXO43602 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
DCXO43602 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 KRT8P49-201ENST00000604166 1432 ntBASIC16.7■□□□□ 0.26
DCXO43602 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCXO43602 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
DCXO43602 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
DCXO43602 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.69■□□□□ 0.26
DCXO43602 HINT2P1-201ENST00000419438 481 ntBASIC16.69■□□□□ 0.26
DCXO43602 NUS1P3-201ENST00000423502 862 ntBASIC16.69■□□□□ 0.26
DCXO43602 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.69■□□□□ 0.26
DCXO43602 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.69■□□□□ 0.26
DCXO43602 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.69■□□□□ 0.26
DCXO43602 U62317.3-201ENST00000608319 855 ntBASIC16.69■□□□□ 0.26
DCXO43602 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.69■□□□□ 0.26
DCXO43602 TSPY26P-202ENST00000565928 3884 ntBASIC16.69■□□□□ 0.26
DCXO43602 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
DCXO43602 HLA-A-202ENST00000376806 1854 ntBASIC16.69■□□□□ 0.26
DCXO43602 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
DCXO43602 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCXO43602 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.69■□□□□ 0.26
DCXO43602 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.68■□□□□ 0.26
DCXO43602 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.68■□□□□ 0.26
DCXO43602 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCXO43602 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCXO43602 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCXO43602 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCXO43602 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.68■□□□□ 0.26
DCXO43602 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
DCXO43602 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DCXO43602 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCXO43602 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCXO43602 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms