Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLOCKO15516 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.1■□□□□ 0.01
CLOCKO15516 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 LINC00552-201ENST00000625151 2579 ntBASIC15.1■□□□□ 0.01
CLOCKO15516 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CLOCKO15516 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLOCKO15516 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.1■□□□□ 0.01
CLOCKO15516 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.1■□□□□ 0.01
CLOCKO15516 KRT18P27-201ENST00000427733 1299 ntBASIC15.1■□□□□ 0.01
CLOCKO15516 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 AC009947.1-201ENST00000444350 727 ntBASIC15.1■□□□□ 0.01
CLOCKO15516 AC108751.1-201ENST00000490852 363 ntBASIC15.1■□□□□ 0.01
CLOCKO15516 RPS15P9-201ENST00000494093 319 ntBASIC15.1■□□□□ 0.01
CLOCKO15516 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.1■□□□□ 0.01
CLOCKO15516 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLOCKO15516 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLOCKO15516 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLOCKO15516 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLOCKO15516 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.09■□□□□ 0.01
CLOCKO15516 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.09■□□□□ 0.01
CLOCKO15516 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.09■□□□□ 0.01
CLOCKO15516 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLOCKO15516 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.09■□□□□ 0.01
CLOCKO15516 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.09■□□□□ 0.01
CLOCKO15516 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLOCKO15516 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.09■□□□□ 0.01
CLOCKO15516 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 AC129492.6-201ENST00000611383 1305 ntBASIC15.09■□□□□ 0.01
CLOCKO15516 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.09■□□□□ 0.01
CLOCKO15516 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 C18orf15-201ENST00000623680 2534 ntBASIC15.09■□□□□ 0.01
CLOCKO15516 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.09■□□□□ 0.01
CLOCKO15516 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLOCKO15516 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms