Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LINC00473A8K010 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00473A8K010 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00473A8K010 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00473A8K010 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 AC099063.4-201ENST00000641099 1602 ntBASIC12.88□□□□□ -0.35
LINC00473A8K010 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00473A8K010 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00473A8K010 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 AC068587.6-202ENST00000641839 5619 ntBASIC12.87□□□□□ -0.35
LINC00473A8K010 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00473A8K010 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 AZGP1P1-201ENST00000411909 902 ntBASIC12.87□□□□□ -0.35
LINC00473A8K010 AL645939.2-201ENST00000427340 991 ntBASIC12.87□□□□□ -0.35
LINC00473A8K010 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00473A8K010 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00473A8K010 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00473A8K010 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00473A8K010 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00473A8K010 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00473A8K010 MTDHP5-201ENST00000598980 586 ntBASIC12.87□□□□□ -0.35
LINC00473A8K010 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC00473A8K010 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00473A8K010 AGAP7P-201ENST00000582299 2062 ntBASIC12.87□□□□□ -0.35
LINC00473A8K010 AGAP14-201ENST00000624701 2060 ntBASIC12.87□□□□□ -0.35
LINC00473A8K010 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00473A8K010 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00473A8K010 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00473A8K010 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00473A8K010 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC00473A8K010 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00473A8K010 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC00473A8K010 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00473A8K010 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
LINC00473A8K010 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00473A8K010 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms