Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 RCN1P1-201ENST00000400413 996 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 DUSP5P1-201ENST00000441325 1139 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AP002383.4-201ENST00000442518 975 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AC132008.2-207ENST00000454517 770 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PHKG1P2-201ENST00000457537 863 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 KRT18P31-201ENST00000506277 1292 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AC109635.5-201ENST00000533593 962 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 MTDHP4-201ENST00000600287 670 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AL078644.1-201ENST00000609881 752 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ACTL9-202ENST00000612068 1252 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PPT1-213ENST00000641319 2388 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC084364.1-201ENST00000551967 1556 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 FAM185BP-201ENST00000443595 716 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 EEF1DP4-201ENST00000446006 880 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 LINC00265-3P-201ENST00000447588 903 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AL031432.2-201ENST00000566714 459 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AL928711.1-201ENST00000570165 459 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC006557.2-201ENST00000592985 1240 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC097359.3-201ENST00000603982 1210 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC008667.4-201ENST00000607370 168 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC012306.2-201ENST00000609350 630 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AC105206.1-202ENST00000314927 2368 ntBASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01546A6NGU7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms