Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL109936.8-201ENST00000641772 604 ntBASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC068587.6-202ENST00000641839 5619 ntBASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC074338.1-201ENST00000416825 156 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 RPL13P2-201ENST00000440687 659 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC004890.2-204ENST00000481968 304 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 RNA5SP421-201ENST00000516864 134 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC044860.1-202ENST00000559481 777 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL390955.2-201ENST00000603032 514 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC087481.3-201ENST00000602886 1894 ntBASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC196A0A1B0GTZ2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC090616.6-203ENST00000579186 1945 ntBASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC093214.1-201ENST00000511688 1107 ntBASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 TMBIM7P-203ENST00000641617 1718 ntBASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms