Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC126365.1-201ENST00000578585 1514 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL109954.1-202ENST00000564051 2148 ntBASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 CLK3P2-201ENST00000427566 1453 ntBASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TRBV5-4A0A0C4DH59 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 SPDYE19P-201ENST00000338590 713 ntBASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 TPRX2P-201ENST00000535362 881 ntBASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC011467.4-201ENST00000594891 528 ntBASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL645728.2-202ENST00000641679 227 ntBASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV5-4A0A0C4DH59 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 MEP1AP4-201ENST00000423244 1087 ntBASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 GNAQP1-201ENST00000444815 1067 ntBASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC093004.1-201ENST00000508850 424 ntBASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 RRP7BP-205ENST00000566851 833 ntBASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 AC099568.2-201ENST00000609194 695 ntBASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-4A0A0C4DH59 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms