Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MIR6799-201ENST00000620297 69 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 CU634019.7-201ENST00000624153 1185 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 FP236241.2-201ENST00000624906 1185 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 COX11-210ENST00000639671 696 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 AC026691.1-201ENST00000602502 2017 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CSNK1G3Q9Y6M4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 RPSAP52-203ENST00000622976 1023 ntBASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSNK1G3Q9Y6M4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AC134915.1-201ENST00000426461 574 ntBASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 KRT223P-202ENST00000449164 1292 ntBASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AC104989.1-201ENST00000519711 778 ntBASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.44■□□□□ 0.06
CSNK1G3Q9Y6M4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms