Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 AC006504.4-201ENST00000592118 1568 ntBASIC15.01□□□□□ -0.01
AP4S1Q9Y587 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.01□□□□□ -0.01
AP4S1Q9Y587 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 AC006504.5-208ENST00000588784 2401 ntBASIC15.01□□□□□ -0.01
AP4S1Q9Y587 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP4S1Q9Y587 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15□□□□□ -0.01
AP4S1Q9Y587 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15□□□□□ -0.01
AP4S1Q9Y587 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15□□□□□ -0.01
AP4S1Q9Y587 RNU1-129P-201ENST00000384064 167 ntBASIC15□□□□□ -0.01
AP4S1Q9Y587 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 AP002469.2-201ENST00000531724 424 ntBASIC15□□□□□ -0.01
AP4S1Q9Y587 U1.21-201ENST00000580816 167 ntBASIC15□□□□□ -0.01
AP4S1Q9Y587 MIR4321-201ENST00000592276 80 ntBASIC15□□□□□ -0.01
AP4S1Q9Y587 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15□□□□□ -0.01
AP4S1Q9Y587 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15□□□□□ -0.01
AP4S1Q9Y587 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15□□□□□ -0.01
AP4S1Q9Y587 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
AP4S1Q9Y587 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
AP4S1Q9Y587 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC005332.1-201ENST00000577698 1310 ntBASIC14.99□□□□□ -0.01
AP4S1Q9Y587 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AP000867.3-201ENST00000524675 377 ntBASIC14.99□□□□□ -0.01
AP4S1Q9Y587 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP4S1Q9Y587 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms