Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 AC089987.1-201ENST00000551654 2209 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 MIR3180-1-201ENST00000580374 94 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 MIR3180-3-201ENST00000584616 94 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 AC020765.3-201ENST00000613051 740 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 INTS4P1-203ENST00000641008 3683 ntBASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRCH1Q9Y2L9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 FAM220CP-201ENST00000395253 831 ntBASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 FAM8A3P-201ENST00000427218 844 ntBASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 NUS1P1-201ENST00000446295 882 ntBASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TPSP2-201ENST00000561760 610 ntBASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 CLEC4GP1-201ENST00000596555 870 ntBASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 AL592071.1-201ENST00000611956 408 ntBASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCH1Q9Y2L9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms