Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF8Q9UPP1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 AP003171.2-201ENST00000528208 925 ntBASIC21.17■□□□□ 0.98
PHF8Q9UPP1 AC005730.2-201ENST00000564549 1184 ntBASIC21.17■□□□□ 0.98
PHF8Q9UPP1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 RN7SL713P-201ENST00000582127 302 ntBASIC21.17■□□□□ 0.98
PHF8Q9UPP1 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF8Q9UPP1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC21.16■□□□□ 0.98
PHF8Q9UPP1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.16■□□□□ 0.98
PHF8Q9UPP1 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.16■□□□□ 0.98
PHF8Q9UPP1 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 RPS2P36-201ENST00000456516 831 ntBASIC21.16■□□□□ 0.98
PHF8Q9UPP1 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 TMEM198B-204ENST00000484016 896 ntBASIC21.16■□□□□ 0.98
PHF8Q9UPP1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 AC073413.1-201ENST00000603927 732 ntBASIC21.16■□□□□ 0.98
PHF8Q9UPP1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHF8Q9UPP1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 TUBBP5-203ENST00000508529 1334 ntBASIC21.15■□□□□ 0.98
PHF8Q9UPP1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 SPCS2P2-201ENST00000603270 608 ntBASIC21.15■□□□□ 0.98
PHF8Q9UPP1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF8Q9UPP1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms