Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 AL589702.1-201ENST00000641229 1509 ntBASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 AC092474.2-201ENST00000424288 719 ntBASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 MIR4321-201ENST00000592276 80 ntBASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 AL136370.1-201ENST00000608166 691 ntBASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RABGEF1Q9UJ41 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AC092127.1-201ENST00000567093 3455 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 SSR1P1-201ENST00000407630 814 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 RBPMS2P1-201ENST00000437762 623 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 KRT18P34-201ENST00000488218 1270 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AC109635.5-201ENST00000533593 962 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AC051619.7-201ENST00000568314 623 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AC107308.1-201ENST00000615897 301 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AC134407.2-201ENST00000625089 1978 ntBASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RABGEF1Q9UJ41 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RABGEF1Q9UJ41 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms