Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 AC105917.1-201ENST00000506637 2539 ntBASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 AL139384.1-201ENST00000612143 3047 ntBASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 AL353779.1-201ENST00000434793 351 ntBASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 CLK3P2-201ENST00000427566 1453 ntBASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 API5-211ENST00000534695 560 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AC036164.1-201ENST00000570544 333 ntBASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AC138761.1-201ENST00000584393 385 ntBASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM248Q9NWD8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 AC087499.6-201ENST00000411576 835 ntBASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 RN7SL399P-201ENST00000471648 279 ntBASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 AC190387.1-201ENST00000551683 408 ntBASIC16.05■□□□□ 0.16
TMEM248Q9NWD8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms