Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF407Q9C0G0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AC124283.3-201ENST00000570869 594 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AL607033.1-201ENST00000623900 1599 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 INTS4P2-202ENST00000614726 2019 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MIR658-201ENST00000385210 100 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AC134915.1-201ENST00000426461 574 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AC093433.1-201ENST00000458048 571 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 DOC2GP-204ENST00000639052 2548 ntBASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF407Q9C0G0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF407Q9C0G0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms