Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 FAM185BP-201ENST00000443595 716 ntBASIC14.09□□□□□ -0.15
RFT1Q96AA3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 AC108751.1-201ENST00000490852 363 ntBASIC14.09□□□□□ -0.15
RFT1Q96AA3 CXCL1P1-201ENST00000502804 216 ntBASIC14.09□□□□□ -0.15
RFT1Q96AA3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 MIR4515-201ENST00000584082 81 ntBASIC14.09□□□□□ -0.15
RFT1Q96AA3 AL031055.1-201ENST00000606362 631 ntBASIC14.09□□□□□ -0.15
RFT1Q96AA3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RFT1Q96AA3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.09□□□□□ -0.15
RFT1Q96AA3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RFT1Q96AA3 AC067750.1-201ENST00000608826 6545 ntBASIC14.08□□□□□ -0.15
RFT1Q96AA3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RFT1Q96AA3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RFT1Q96AA3 AC091951.1-201ENST00000512854 2465 ntBASIC14.08□□□□□ -0.15
RFT1Q96AA3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RFT1Q96AA3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RFT1Q96AA3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RFT1Q96AA3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RFT1Q96AA3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RFT1Q96AA3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RFT1Q96AA3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.08□□□□□ -0.15
RFT1Q96AA3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 RNU1-129P-201ENST00000384064 167 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 HMGA1P7-201ENST00000406908 502 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AL160237.2-201ENST00000556165 472 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 U1.21-201ENST00000580816 167 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AL691432.3-201ENST00000621860 400 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AL592424.1-201ENST00000563624 1536 ntBASIC14.08□□□□□ -0.16
RFT1Q96AA3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.08□□□□□ -0.16
RFT1Q96AA3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFT1Q96AA3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.07□□□□□ -0.16
RFT1Q96AA3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFT1Q96AA3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms