Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 LINC00554-201ENST00000564841 3011 ntBASIC16.71■□□□□ 0.27
ATP2A3Q93084 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 AC093004.1-201ENST00000508850 424 ntBASIC16.71■□□□□ 0.27
ATP2A3Q93084 DOC2GP-202ENST00000514950 1163 ntBASIC16.71■□□□□ 0.27
ATP2A3Q93084 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP2A3Q93084 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A3Q93084 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ATP2A3Q93084 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
ATP2A3Q93084 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 MST1L-201ENST00000442552 2185 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 AC098614.1-201ENST00000368528 745 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 SDHAP3-202ENST00000515467 728 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 AC044860.1-202ENST00000559481 777 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 MIR6069-201ENST00000620069 79 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 LINC01144-201ENST00000626198 1710 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A3Q93084 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.7■□□□□ 0.26
ATP2A3Q93084 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATP2A3Q93084 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A3Q93084 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A3Q93084 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms