Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL596257.1-201ENST00000641463 2694 ntBASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 GNAQP1-201ENST00000444815 1067 ntBASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 SPTLC1P1-201ENST00000447199 261 ntBASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 RN7SL204P-201ENST00000582831 262 ntBASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 AL391069.4-201ENST00000609583 481 ntBASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ZIC4Q8N9L1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 SSR4P1-203ENST00000599569 2260 ntBASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 DOC2GP-202ENST00000514950 1163 ntBASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 AC136621.1-201ENST00000624017 2304 ntBASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC4Q8N9L1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 SPDYE19P-201ENST00000338590 713 ntBASIC13.92□□□□□ -0.18
ZIC4Q8N9L1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms