Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 ALG1L8P-201ENST00000533887 760 ntBASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 AC004461.1-201ENST00000412461 403 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 KRT18P32-201ENST00000424695 1287 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 AC055717.3-201ENST00000622967 595 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 AL513210.1-201ENST00000629608 234 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 AL607033.1-201ENST00000623900 1599 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 PKD1P5-201ENST00000532415 10291 ntBASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC83Q8IWF9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC83Q8IWF9 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 MST1L-201ENST00000442552 2185 ntBASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 AL513477.1-201ENST00000602865 2407 ntBASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC83Q8IWF9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC83Q8IWF9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms