Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 HCG4-201ENST00000418983 998 ntBASIC14.88□□□□□ -0.03
CCDC71Q8IV32 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 SPDYE14P-201ENST00000442619 822 ntBASIC14.88□□□□□ -0.03
CCDC71Q8IV32 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.88□□□□□ -0.03
CCDC71Q8IV32 AC109635.5-201ENST00000533593 962 ntBASIC14.88□□□□□ -0.03
CCDC71Q8IV32 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 AL031055.1-201ENST00000606362 631 ntBASIC14.88□□□□□ -0.03
CCDC71Q8IV32 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 AL390754.1-201ENST00000619088 582 ntBASIC14.88□□□□□ -0.03
CCDC71Q8IV32 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC71Q8IV32 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.87□□□□□ -0.03
CCDC71Q8IV32 AC026748.1-201ENST00000624349 3251 ntBASIC14.87□□□□□ -0.03
CCDC71Q8IV32 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 AC236430.1-201ENST00000402231 743 ntBASIC14.87□□□□□ -0.03
CCDC71Q8IV32 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 MIR6080-201ENST00000617359 66 ntBASIC14.87□□□□□ -0.03
CCDC71Q8IV32 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC71Q8IV32 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC71Q8IV32 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms