Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF20Q5VTR2 HYMAI-201ENST00000635591 3347 ntBASIC18.89■□□□□ 0.62
RNF20Q5VTR2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 HIST3H2BA-201ENST00000436555 524 ntBASIC18.89■□□□□ 0.61
RNF20Q5VTR2 CNN2P2-201ENST00000443536 909 ntBASIC18.89■□□□□ 0.61
RNF20Q5VTR2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 CNN2P3-201ENST00000450201 906 ntBASIC18.89■□□□□ 0.61
RNF20Q5VTR2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 AL136317.3-201ENST00000618497 906 ntBASIC18.89■□□□□ 0.61
RNF20Q5VTR2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF20Q5VTR2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 SERBP1P3-201ENST00000459980 809 ntBASIC18.88■□□□□ 0.61
RNF20Q5VTR2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AC109322.1-201ENST00000524499 1264 ntBASIC18.88■□□□□ 0.61
RNF20Q5VTR2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AC025678.2-201ENST00000562061 970 ntBASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 MIR6069-201ENST00000620069 79 ntBASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AL607033.1-201ENST00000623900 1599 ntBASIC18.88■□□□□ 0.61
RNF20Q5VTR2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 AC068418.2-201ENST00000577309 3703 ntBASIC18.88■□□□□ 0.61
RNF20Q5VTR2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF20Q5VTR2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms