Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 AC092580.3-201ENST00000430932 139 ntBASIC14.55□□□□□ -0.08
CLDN20P56880 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 AC093214.1-201ENST00000511688 1107 ntBASIC14.55□□□□□ -0.08
CLDN20P56880 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.55□□□□□ -0.08
CLDN20P56880 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 AL390754.1-201ENST00000619088 582 ntBASIC14.55□□□□□ -0.08
CLDN20P56880 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CLDN20P56880 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.55□□□□□ -0.08
CLDN20P56880 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN20P56880 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN20P56880 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLDN20P56880 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CLDN20P56880 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN20P56880 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN20P56880 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN20P56880 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.54□□□□□ -0.08
CLDN20P56880 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.54□□□□□ -0.08
CLDN20P56880 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN20P56880 AC027369.6-201ENST00000525520 931 ntBASIC14.54□□□□□ -0.08
CLDN20P56880 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.54□□□□□ -0.08
CLDN20P56880 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN20P56880 AL589739.1-201ENST00000607720 493 ntBASIC14.54□□□□□ -0.08
CLDN20P56880 AL138828.2-201ENST00000615812 383 ntBASIC14.54□□□□□ -0.08
CLDN20P56880 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN20P56880 AC073592.8-201ENST00000624126 511 ntBASIC14.54□□□□□ -0.08
CLDN20P56880 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN20P56880 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN20P56880 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN20P56880 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN20P56880 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN20P56880 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN20P56880 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN20P56880 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN20P56880 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN20P56880 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN20P56880 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms