Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCKAP1LP55160 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.24■□□□□ 0.35
NCKAP1LP55160 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 MIR3197-201ENST00000582241 73 ntBASIC17.23■□□□□ 0.35
NCKAP1LP55160 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCKAP1LP55160 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 AC007541.1-201ENST00000570282 1469 ntBASIC17.23■□□□□ 0.35
NCKAP1LP55160 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.23■□□□□ 0.35
NCKAP1LP55160 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 PIN1P1-201ENST00000412108 996 ntBASIC17.22■□□□□ 0.35
NCKAP1LP55160 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 API5-211ENST00000534695 560 ntTSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 AL391825.1-201ENST00000457671 1364 ntBASIC17.22■□□□□ 0.35
NCKAP1LP55160 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCKAP1LP55160 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NCKAP1LP55160 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCKAP1LP55160 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 AC190387.1-201ENST00000551683 408 ntBASIC17.21■□□□□ 0.35
NCKAP1LP55160 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 AC138761.1-201ENST00000584393 385 ntBASIC17.21■□□□□ 0.35
NCKAP1LP55160 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.21■□□□□ 0.35
NCKAP1LP55160 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms