Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.1■□□□□ 0.01
NR1H2P55055 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.1■□□□□ 0.01
NR1H2P55055 MTDHP5-201ENST00000598980 586 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.1■□□□□ 0.01
NR1H2P55055 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.1■□□□□ 0.01
NR1H2P55055 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NR1H2P55055 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
NR1H2P55055 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.1■□□□□ 0.01
NR1H2P55055 AC010327.5-201ENST00000586923 3061 ntBASIC15.1■□□□□ 0.01
NR1H2P55055 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR1H2P55055 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NR1H2P55055 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
NR1H2P55055 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 LINC01144-201ENST00000626198 1710 ntBASIC15.09■□□□□ 0.01
NR1H2P55055 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.09■□□□□ 0.01
NR1H2P55055 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 YBX2P1-201ENST00000394192 760 ntBASIC15.09■□□□□ 0.01
NR1H2P55055 GPX1P2-201ENST00000429271 606 ntBASIC15.09■□□□□ 0.01
NR1H2P55055 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.09■□□□□ 0.01
NR1H2P55055 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.09■□□□□ 0.01
NR1H2P55055 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.09■□□□□ 0.01
NR1H2P55055 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.09■□□□□ 0.01
NR1H2P55055 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.09■□□□□ 0.01
NR1H2P55055 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 AC117489.1-201ENST00000625169 3217 ntBASIC15.09■□□□□ 0.01
NR1H2P55055 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NR1H2P55055 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.09■□□□□ 0.01
NR1H2P55055 AL512652.2-201ENST00000625156 1716 ntBASIC15.09■□□□□ 0.01
NR1H2P55055 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H2P55055 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NR1H2P55055 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.08■□□□□ 0.01
NR1H2P55055 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H2P55055 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H2P55055 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.08■□□□□ 0.01
NR1H2P55055 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.08■□□□□ 0.01
NR1H2P55055 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
NR1H2P55055 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.08■□□□□ 0.01
NR1H2P55055 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.08■□□□□ 0.01
NR1H2P55055 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NR1H2P55055 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.08■□□□□ 0
NR1H2P55055 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.08■□□□□ 0
NR1H2P55055 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 AC009336.1-201ENST00000608941 1553 ntBASIC15.08■□□□□ 0
NR1H2P55055 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.08■□□□□ 0
NR1H2P55055 AC148477.5-201ENST00000625164 1645 ntBASIC15.08■□□□□ 0
NR1H2P55055 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR1H2P55055 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.08■□□□□ 0
NR1H2P55055 PRSS29P-201ENST00000440800 595 ntBASIC15.08■□□□□ 0
NR1H2P55055 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms