Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.8□□□□□ -0.2
ATP1B3P54709 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.8□□□□□ -0.2
ATP1B3P54709 AC073389.1-201ENST00000595595 795 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 SPTSSB-204ENST00000617024 1292 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 AL513190.1-201ENST00000621254 727 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 AKAP8P1-201ENST00000434743 1349 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ATP1B3P54709 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 CICP24-201ENST00000605464 2705 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 SSR4P1-203ENST00000599569 2260 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.8□□□□□ -0.2
ATP1B3P54709 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 AC106881.1-201ENST00000605849 3329 ntBASIC13.8□□□□□ -0.2
ATP1B3P54709 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ATP1B3P54709 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATP1B3P54709 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
ATP1B3P54709 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ATP1B3P54709 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ATP1B3P54709 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ATP1B3P54709 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.79□□□□□ -0.2
ATP1B3P54709 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 AC243562.2-201ENST00000561247 970 ntBASIC13.79□□□□□ -0.2
ATP1B3P54709 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.79□□□□□ -0.2
ATP1B3P54709 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.79□□□□□ -0.2
ATP1B3P54709 BX640515.1-201ENST00000617215 977 ntBASIC13.79□□□□□ -0.2
ATP1B3P54709 FAM197Y3-203ENST00000618346 717 ntBASIC13.79□□□□□ -0.2
ATP1B3P54709 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ATP1B3P54709 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.79□□□□□ -0.2
ATP1B3P54709 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATP1B3P54709 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.79□□□□□ -0.2
ATP1B3P54709 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
ATP1B3P54709 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATP1B3P54709 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 CICP4-201ENST00000447359 2812 ntBASIC13.78□□□□□ -0.2
ATP1B3P54709 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.78□□□□□ -0.2
ATP1B3P54709 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATP1B3P54709 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.78□□□□□ -0.2
ATP1B3P54709 AL671277.1-201ENST00000429656 993 ntBASIC13.78□□□□□ -0.2
ATP1B3P54709 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.78□□□□□ -0.2
ATP1B3P54709 FAM86C2P-203ENST00000528684 1004 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms