Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CLCN2P51788 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN2P51788 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCN2P51788 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CLCN2P51788 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN2P51788 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN2P51788 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
CLCN2P51788 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCN2P51788 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CLCN2P51788 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.39■□□□□ 0.05
CLCN2P51788 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 UXT-AS1-201ENST00000590504 1525 ntBASIC15.39■□□□□ 0.05
CLCN2P51788 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 KRT18P32-201ENST00000424695 1287 ntBASIC15.39■□□□□ 0.05
CLCN2P51788 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCN2P51788 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.39■□□□□ 0.05
CLCN2P51788 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.39■□□□□ 0.05
CLCN2P51788 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 MROH4P-201ENST00000431302 1578 ntBASIC15.39■□□□□ 0.05
CLCN2P51788 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.39■□□□□ 0.05
CLCN2P51788 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.39■□□□□ 0.05
CLCN2P51788 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLCN2P51788 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN2P51788 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN2P51788 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 PMS2P2-201ENST00000425039 1128 ntBASIC15.38■□□□□ 0.05
CLCN2P51788 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN2P51788 AC069335.1-201ENST00000489972 472 ntBASIC15.38■□□□□ 0.05
CLCN2P51788 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.38■□□□□ 0.05
CLCN2P51788 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN2P51788 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN2P51788 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN2P51788 AC027307.2-201ENST00000591252 911 ntBASIC15.38■□□□□ 0.05
CLCN2P51788 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN2P51788 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.38■□□□□ 0.05
CLCN2P51788 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms