Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC3P51654 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC3P51654 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 AC011477.6-201ENST00000604980 1927 ntBASIC17.41■□□□□ 0.38
GPC3P51654 AL607033.1-201ENST00000623900 1599 ntBASIC17.41■□□□□ 0.38
GPC3P51654 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.41■□□□□ 0.38
GPC3P51654 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.41■□□□□ 0.38
GPC3P51654 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.41■□□□□ 0.38
GPC3P51654 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.41■□□□□ 0.38
GPC3P51654 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
GPC3P51654 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.41■□□□□ 0.38
GPC3P51654 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.41■□□□□ 0.38
GPC3P51654 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GPC3P51654 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GPC3P51654 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.4■□□□□ 0.38
GPC3P51654 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GPC3P51654 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
GPC3P51654 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
GPC3P51654 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.4■□□□□ 0.38
GPC3P51654 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.4■□□□□ 0.38
GPC3P51654 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.4■□□□□ 0.38
GPC3P51654 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.4■□□□□ 0.38
GPC3P51654 AP005117.1-202ENST00000581724 1908 ntBASIC17.4■□□□□ 0.38
GPC3P51654 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
GPC3P51654 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GPC3P51654 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.39■□□□□ 0.38
GPC3P51654 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
GPC3P51654 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
GPC3P51654 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC3P51654 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.39■□□□□ 0.37
GPC3P51654 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.39■□□□□ 0.37
GPC3P51654 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
GPC3P51654 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC3P51654 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GPC3P51654 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC3P51654 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.39■□□□□ 0.37
GPC3P51654 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC3P51654 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.39■□□□□ 0.37
GPC3P51654 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.39■□□□□ 0.37
GPC3P51654 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.39■□□□□ 0.37
GPC3P51654 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
GPC3P51654 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.39■□□□□ 0.37
GPC3P51654 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GPC3P51654 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
GPC3P51654 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.39■□□□□ 0.37
GPC3P51654 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GPC3P51654 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms