Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VARSP26640 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.65■□□□□ 0.1
VARSP26640 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
VARSP26640 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.64■□□□□ 0.09
VARSP26640 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.64■□□□□ 0.09
VARSP26640 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.64■□□□□ 0.09
VARSP26640 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 SLC25A39P2-201ENST00000537614 270 ntBASIC15.64■□□□□ 0.09
VARSP26640 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.64■□□□□ 0.09
VARSP26640 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VARSP26640 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VARSP26640 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.64■□□□□ 0.09
VARSP26640 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VARSP26640 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.63■□□□□ 0.09
VARSP26640 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.63■□□□□ 0.09
VARSP26640 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.63■□□□□ 0.09
VARSP26640 HAUS4P1-201ENST00000406739 1145 ntBASIC15.63■□□□□ 0.09
VARSP26640 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 BASP1P1-201ENST00000430708 665 ntBASIC15.63■□□□□ 0.09
VARSP26640 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.63■□□□□ 0.09
VARSP26640 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.63■□□□□ 0.09
VARSP26640 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VARSP26640 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.63■□□□□ 0.09
VARSP26640 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.63■□□□□ 0.09
VARSP26640 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.63■□□□□ 0.09
VARSP26640 KRT8P23-201ENST00000560090 1207 ntBASIC15.63■□□□□ 0.09
VARSP26640 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.63■□□□□ 0.09
VARSP26640 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.63■□□□□ 0.09
VARSP26640 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VARSP26640 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.63■□□□□ 0.09
VARSP26640 AC009093.7-201ENST00000623853 1223 ntBASIC15.63■□□□□ 0.09
VARSP26640 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.63■□□□□ 0.09
VARSP26640 AL359258.3-201ENST00000622910 2331 ntBASIC15.63■□□□□ 0.09
VARSP26640 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
VARSP26640 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
VARSP26640 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
VARSP26640 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
VARSP26640 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARSP26640 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VARSP26640 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.62■□□□□ 0.09
VARSP26640 AC008677.1-201ENST00000519230 1561 ntBASIC15.62■□□□□ 0.09
VARSP26640 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VARSP26640 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.62■□□□□ 0.09
VARSP26640 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms