Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.61□□□□□ -0.23
CD40P25942 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 IGHV3-72-202ENST00000621503 303 ntBASIC13.61□□□□□ -0.23
CD40P25942 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD40P25942 AL591163.1-201ENST00000641757 987 ntBASIC13.61□□□□□ -0.23
CD40P25942 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD40P25942 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD40P25942 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CD40P25942 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CD40P25942 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 AL442647.2-201ENST00000429864 857 ntBASIC13.6□□□□□ -0.23
CD40P25942 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.6□□□□□ -0.23
CD40P25942 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 RN7SL837P-201ENST00000463010 287 ntBASIC13.6□□□□□ -0.23
CD40P25942 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.6□□□□□ -0.23
CD40P25942 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.6□□□□□ -0.23
CD40P25942 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.6□□□□□ -0.23
CD40P25942 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.6□□□□□ -0.23
CD40P25942 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.6□□□□□ -0.23
CD40P25942 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 AL033527.5-201ENST00000641382 801 ntBASIC13.6□□□□□ -0.23
CD40P25942 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD40P25942 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CD40P25942 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 AL118508.1-201ENST00000613502 2345 ntBASIC13.59□□□□□ -0.23
CD40P25942 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.59□□□□□ -0.23
CD40P25942 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CD40P25942 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD40P25942 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms