Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.82□□□□□ -0.04
NR4A1P22736 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NR4A1P22736 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
NR4A1P22736 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NR4A1P22736 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NR4A1P22736 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
NR4A1P22736 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.82□□□□□ -0.04
NR4A1P22736 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR4A1P22736 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
NR4A1P22736 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.81□□□□□ -0.04
NR4A1P22736 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.81□□□□□ -0.04
NR4A1P22736 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 PI4KAP1-204ENST00000612579 1703 ntBASIC14.81□□□□□ -0.04
NR4A1P22736 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 AC087481.3-201ENST00000602886 1894 ntBASIC14.81□□□□□ -0.04
NR4A1P22736 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 MIR574-201ENST00000385209 96 ntBASIC14.81□□□□□ -0.04
NR4A1P22736 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 TERC-201ENST00000602385 541 ntBASIC14.81□□□□□ -0.04
NR4A1P22736 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
NR4A1P22736 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.81□□□□□ -0.04
NR4A1P22736 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR4A1P22736 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NR4A1P22736 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NR4A1P22736 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.8□□□□□ -0.04
NR4A1P22736 PMS2P1-201ENST00000431037 1228 ntBASIC14.8□□□□□ -0.04
NR4A1P22736 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 KRT18P58-201ENST00000527480 1120 ntBASIC14.8□□□□□ -0.04
NR4A1P22736 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.8□□□□□ -0.04
NR4A1P22736 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR4A1P22736 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR4A1P22736 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms