Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC130P13994 SLED1-202ENST00000512051 380 ntBASIC16.74■□□□□ 0.27
CCDC130P13994 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC130P13994 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC130P13994 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC130P13994 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC130P13994 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC130P13994 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC130P13994 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC130P13994 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC130P13994 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC130P13994 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC130P13994 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC130P13994 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC130P13994 AC007541.1-201ENST00000570282 1469 ntBASIC16.73■□□□□ 0.27
CCDC130P13994 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC130P13994 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC130P13994 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC130P13994 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CCDC130P13994 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCDC130P13994 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC130P13994 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 TPRX2P-201ENST00000535362 881 ntBASIC16.73■□□□□ 0.27
CCDC130P13994 AC190387.1-201ENST00000551683 408 ntBASIC16.73■□□□□ 0.27
CCDC130P13994 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CCDC130P13994 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC130P13994 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC130P13994 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC130P13994 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC130P13994 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC130P13994 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC130P13994 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC130P13994 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 AC015922.1-201ENST00000421102 1152 ntBASIC16.72■□□□□ 0.27
CCDC130P13994 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC130P13994 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC130P13994 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 AC092127.1-201ENST00000567093 3455 ntBASIC16.72■□□□□ 0.27
CCDC130P13994 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC130P13994 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC130P13994 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC130P13994 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC130P13994 AC132872.4-202ENST00000622924 2756 ntBASIC16.72■□□□□ 0.27
CCDC130P13994 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms