Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AP001160.2-201ENST00000596071 487 ntBASIC13.77□□□□□ -0.21
CSF1P09603 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
CSF1P09603 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.77□□□□□ -0.21
CSF1P09603 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.77□□□□□ -0.21
CSF1P09603 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.77□□□□□ -0.21
CSF1P09603 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.77□□□□□ -0.21
CSF1P09603 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CSF1P09603 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CSF1P09603 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.77□□□□□ -0.21
CSF1P09603 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSF1P09603 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CSF1P09603 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 AGAP7P-201ENST00000582299 2062 ntBASIC13.76□□□□□ -0.21
CSF1P09603 AGAP14-201ENST00000624701 2060 ntBASIC13.76□□□□□ -0.21
CSF1P09603 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 AC007967.2-201ENST00000432613 625 ntBASIC13.76□□□□□ -0.21
CSF1P09603 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.76□□□□□ -0.21
CSF1P09603 AC112482.1-201ENST00000492080 688 ntBASIC13.76□□□□□ -0.21
CSF1P09603 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.76□□□□□ -0.21
CSF1P09603 UNC93B6-202ENST00000528242 690 ntBASIC13.76□□□□□ -0.21
CSF1P09603 AC005412.3-201ENST00000580309 715 ntBASIC13.76□□□□□ -0.21
CSF1P09603 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.76□□□□□ -0.21
CSF1P09603 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 AC091951.1-201ENST00000512854 2465 ntBASIC13.76□□□□□ -0.21
CSF1P09603 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CSF1P09603 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.76□□□□□ -0.21
CSF1P09603 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CSF1P09603 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CSF1P09603 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms