Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE3O75131 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 NORAD-201ENST00000565493 5339 ntBASIC15.26■□□□□ 0.03
CPNE3O75131 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 AC126755.1-201ENST00000525846 6405 ntBASIC15.26■□□□□ 0.03
CPNE3O75131 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CPNE3O75131 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 SPDYE19P-201ENST00000338590 713 ntBASIC15.26■□□□□ 0.03
CPNE3O75131 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE3O75131 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE3O75131 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE3O75131 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE3O75131 GNAQP1-201ENST00000444815 1067 ntBASIC15.26■□□□□ 0.03
CPNE3O75131 API5-211ENST00000534695 560 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE3O75131 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 CYP4F24P-201ENST00000586049 1580 ntBASIC15.26■□□□□ 0.03
CPNE3O75131 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE3O75131 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE3O75131 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 AC006449.5-201ENST00000610658 2098 ntBASIC15.26■□□□□ 0.03
CPNE3O75131 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CPNE3O75131 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CPNE3O75131 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.25■□□□□ 0.03
CPNE3O75131 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CPNE3O75131 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CPNE3O75131 NME2P1-201ENST00000426182 414 ntBASIC15.25■□□□□ 0.03
CPNE3O75131 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 KRT17P7-201ENST00000451704 1104 ntBASIC15.25■□□□□ 0.03
CPNE3O75131 AC245100.5-201ENST00000452108 331 ntBASIC15.25■□□□□ 0.03
CPNE3O75131 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE3O75131 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.25■□□□□ 0.03
CPNE3O75131 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CPNE3O75131 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE3O75131 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.25■□□□□ 0.03
CPNE3O75131 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CPNE3O75131 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 CU639417.3-201ENST00000624240 1404 ntBASIC15.25■□□□□ 0.03
CPNE3O75131 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE3O75131 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE3O75131 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CPNE3O75131 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE3O75131 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE3O75131 FO393414.2-201ENST00000405153 598 ntBASIC15.24■□□□□ 0.03
CPNE3O75131 COX5BP8-201ENST00000416911 349 ntBASIC15.24■□□□□ 0.03
CPNE3O75131 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms