Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PEX1O43933 AC091812.2-201ENST00000619081 385 ntBASIC15.52■□□□□ 0.08
PEX1O43933 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.52■□□□□ 0.08
PEX1O43933 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.52■□□□□ 0.08
PEX1O43933 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
PEX1O43933 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.52■□□□□ 0.07
PEX1O43933 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PEX1O43933 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
PEX1O43933 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PEX1O43933 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
PEX1O43933 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PEX1O43933 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PEX1O43933 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.51■□□□□ 0.07
PEX1O43933 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.51■□□□□ 0.07
PEX1O43933 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PEX1O43933 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 AC254562.1-201ENST00000417586 456 ntBASIC15.51■□□□□ 0.07
PEX1O43933 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 ACTG1P14-201ENST00000446382 1122 ntBASIC15.51■□□□□ 0.07
PEX1O43933 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 AC107918.2-201ENST00000530817 355 ntBASIC15.51■□□□□ 0.07
PEX1O43933 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 AL031432.2-201ENST00000566714 459 ntBASIC15.51■□□□□ 0.07
PEX1O43933 AL928711.1-201ENST00000570165 459 ntBASIC15.51■□□□□ 0.07
PEX1O43933 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PEX1O43933 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.51■□□□□ 0.07
PEX1O43933 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.51■□□□□ 0.07
PEX1O43933 AC013726.1-201ENST00000563747 2285 ntBASIC15.51■□□□□ 0.07
PEX1O43933 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.51■□□□□ 0.07
PEX1O43933 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.51■□□□□ 0.07
PEX1O43933 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PEX1O43933 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PEX1O43933 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.5■□□□□ 0.07
PEX1O43933 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.5■□□□□ 0.07
PEX1O43933 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PEX1O43933 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms