Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.73■□□□□ 0.43
ACTN4O43707 AC126365.1-201ENST00000578585 1514 ntBASIC17.73■□□□□ 0.43
ACTN4O43707 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.73■□□□□ 0.43
ACTN4O43707 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.73■□□□□ 0.43
ACTN4O43707 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.73■□□□□ 0.43
ACTN4O43707 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.73■□□□□ 0.43
ACTN4O43707 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.73■□□□□ 0.43
ACTN4O43707 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.73■□□□□ 0.43
ACTN4O43707 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.73■□□□□ 0.43
ACTN4O43707 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.73■□□□□ 0.43
ACTN4O43707 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ACTN4O43707 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.73■□□□□ 0.43
ACTN4O43707 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.72■□□□□ 0.43
ACTN4O43707 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ACTN4O43707 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 UPF3AP3-201ENST00000420996 769 ntBASIC17.72■□□□□ 0.43
ACTN4O43707 BX842568.4-201ENST00000421222 227 ntBASIC17.72■□□□□ 0.43
ACTN4O43707 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 AC004835.2-201ENST00000603762 682 ntBASIC17.72■□□□□ 0.43
ACTN4O43707 RN7SL828P-201ENST00000607615 303 ntBASIC17.72■□□□□ 0.43
ACTN4O43707 AC003101.2-201ENST00000612557 442 ntBASIC17.72■□□□□ 0.43
ACTN4O43707 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
ACTN4O43707 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ACTN4O43707 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.72■□□□□ 0.43
ACTN4O43707 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.72■□□□□ 0.43
ACTN4O43707 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.72■□□□□ 0.43
ACTN4O43707 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.72■□□□□ 0.43
ACTN4O43707 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.71■□□□□ 0.43
ACTN4O43707 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ACTN4O43707 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
ACTN4O43707 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.71■□□□□ 0.43
ACTN4O43707 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ACTN4O43707 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.71■□□□□ 0.43
ACTN4O43707 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.71■□□□□ 0.43
ACTN4O43707 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.71■□□□□ 0.43
ACTN4O43707 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.71■□□□□ 0.43
ACTN4O43707 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.71■□□□□ 0.43
ACTN4O43707 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ACTN4O43707 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ACTN4O43707 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.71■□□□□ 0.43
ACTN4O43707 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ACTN4O43707 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms