Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AL512652.2-201ENST00000625156 1716 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 WASH3P-207ENST00000560956 1394 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 FO538757.1-201ENST00000623083 1397 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 MIR497HG-202ENST00000572453 3838 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC110048.1-201ENST00000604293 2157 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CIC-204ENST00000572681 8218 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 UQCRFS1P1-201ENST00000435169 820 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AL512631.2-201ENST00000604634 923 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC106739.1-201ENST00000617035 715 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms