Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CSNK1G3Q9Y6M4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 AC136604.1-201ENST00000418535 575 ntBASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 SLED1-202ENST00000512051 380 ntBASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 AC233724.13-201ENST00000598383 410 ntBASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 AL450472.2-201ENST00000603663 1156 ntBASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSNK1G3Q9Y6M4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 AC092364.2-201ENST00000596710 2692 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 USP32P1-208ENST00000506594 1164 ntBASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.46■□□□□ 0.07
CSNK1G3Q9Y6M4 AC133552.6-201ENST00000613406 534 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms