Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HDGFL3Q9Y3E1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AP003680.1-201ENST00000598970 3660 ntBASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 TSSK5P-201ENST00000423978 907 ntBASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AL512638.1-201ENST00000457493 794 ntBASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AL844908.2-201ENST00000609461 460 ntBASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 BTBD7P1-201ENST00000447253 1453 ntBASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDGFL3Q9Y3E1 AC023824.1-201ENST00000562945 2975 ntBASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 RNA5SP421-201ENST00000516864 134 ntBASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms