Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 AC005089.1-201ENST00000619486 2241 ntBASIC14.03□□□□□ -0.16
DUX4Q9UBX2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 CICP4-201ENST00000447359 2812 ntBASIC14.03□□□□□ -0.16
DUX4Q9UBX2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX4Q9UBX2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DUX4Q9UBX2 AL353732.1-201ENST00000569618 1459 ntBASIC14.02□□□□□ -0.16
DUX4Q9UBX2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 MIR4492-201ENST00000581627 80 ntBASIC14.02□□□□□ -0.17
DUX4Q9UBX2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX4Q9UBX2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 SNX33P1-201ENST00000592116 1762 ntBASIC14.01□□□□□ -0.17
DUX4Q9UBX2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 AC006277.1-201ENST00000624348 1610 ntBASIC14.01□□□□□ -0.17
DUX4Q9UBX2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.01□□□□□ -0.17
DUX4Q9UBX2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 AC005412.3-201ENST00000580309 715 ntBASIC14.01□□□□□ -0.17
DUX4Q9UBX2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms