Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF3BQ9BZI7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AC005237.2-201ENST00000434368 219 ntBASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AC011467.4-201ENST00000594891 528 ntBASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AL513210.1-201ENST00000629608 234 ntBASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 AC127383.1-201ENST00000444697 1800 ntBASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF3BQ9BZI7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 AC004461.1-201ENST00000412461 403 ntBASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 AL645939.2-201ENST00000427340 991 ntBASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 BANF1P1-201ENST00000553684 263 ntBASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF3BQ9BZI7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 YBX1P5-201ENST00000509441 847 ntBASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 AL450472.2-201ENST00000603663 1156 ntBASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms